It's possible the the FAA tweaked the data, I suppose. Did the change happen across a database update? Keep in mind we don't do any complex processing of the data from what we get from the US government, except to put it in a Dynon-readable format. If it's wrong in the data, it will be wrong on the screen.
There's no way to change the alignment of the world/data. Remember that even a stellar GPS fix only gets you down to 10s of feet of accuracy.