Mine does not do that but I have a 430W and I am not sure but sounds like there may be something up with their integration with the 650.
Dynon support will need to confirm.
This is an example of what should happen:
Say you are flying toward a VOR station due North of your position and there is no wind.
The OBS/course should be set to N or 360°
The heading indication should be N or 360°
The CDI indication should be centered if you are on the course, over to the right if you are left of course and over to the left if you are right of course. The TO/FROM indication should be indicating TO
Once you cross the station, all that should happen is the TO/FROM indication should start indicating FROM.
The CDI indicator should still indicate right if you are left of course and left if you are right of course.
If this is not true, then there is something wrong with the 650 integration with the Dynon.