Yes the alarm resets after every engine shutdown, but that is exactly what you want.
I respectfully disagree, that is not what I want.
As you noted, the SkyView Fuel Computer will accurately keep track of "Gallons Used" and "Gallons Remaining". "Gallons Used" does, and should, reset after every shutdown. The Fuel Computer will be as accurate as the "K" factor of your fuel flow transducer. I have had to tweak my K factor a few times over the past 13 years and the Skyview fuel consumption calculations have always been accurate within a few tenths when I check it at fill up.
If you fly a tandem aircraft you can easily tell when the tanks are not balanced. My use case is a simple one, I want to keep the tanks balanced. I do that by switching tanks every X gallons and keep a manual tally on a pad of paper in the cockpit. This method has served me well for 13 years. At any point in time during flight I know how much fuel I have in each tank, within a tenth of a gallon. My manual calculations are crossed checked with the Fuel Computers calculations. I only occasionally look at my fuel tank sensor readouts
In it's current state, the alarm does not maintain the integrity of the math across engine starts. If the alarm alerted every "X" gallons, independent of engine starts, I could use it to balance my tanks. Unfortunately, that is not the case.